Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931439.1_cds_XP_016478257.1_69915
CDS Infomation

[gene=LOC107799631] [db_xref=GeneID:107799631] [protein=root phototropism protein 2-like] [protein_id=XP_016478257.1] [location=complement(join(94705..95190,95858..96586,96657..97034,97129..97198,97285..97346))] [gbkey=CDS]
Sequence

ATGGCTGTTCCTATCAAGAATACAAATCGACTCTCTCTTGCCATGGAAAGAACTGGCCAA
TGGGTGTTTTCCCAAGAAATTCCAACTGATGTTGTTGTTGAAGTAGGTGAAGCAAACTTT
AATCTTCACAAGTTCATGCTTGTGGCGAAGAGCAACTACATAAGGAAACTTATACTAGAG
TCTAAAGAAACAGAAGTAACGAGGATAAACTTGTCTGAGATACCAGGAGGTCCTGAGATG
TTTGAAAAAGCAGCCAAGTTTTGCTATGGAGTCAACTTTGAAATCACAGTTCATAATGTA
GCTGCTCTTCGTTGTGCTGCTGACTACTTACAAATGACTGATAAATACTGCGATAACAAT
CTTGCTAGCAGGACAGAAGATTTCCTAGCCCAAGTTGCCTTGACTAGCCTTTCTGGCGCA
CTTGTCGTATTAAAGTCTTGTGAAAATCTTCTTCCCCTTGCTGAGGAACTCAACATCGTT
CAAAGATGTGTTGAAATCGCCAGTGCTAAGGCATGTGTGGAGGCGAATTTTCCAAGCAGA
TCACCACCAAATTGGTGGACGGAAGAGTTAACCATATTAGACATAGCATTTTTCGAAAGA
ATTATCATTTCGATGAAAACTCGGGGAGCAAAAGCGTTGACCGCAGCAAGTGCTATAATC
ACGTATACAGAGAGATCTCTTCGTGACCTTGTACGTGACCACTCCGGAAATGGAACCAGA
TTAGTCGAGCCAGAGGACTCCGACATCAGGATGCATCAACGCCAACTTCTCGAGTCAATT
GTCAAACTCTTACCTGCGGACAAAGCAGCTTTTCCCATCAATTTCCTATGTTGTCTCCTC
CGTACAGCAATTTTCTTAAGAGCAGCTAATAGTTGCAAGAATGAATTGGAGAAGAGGATA
TCAGCAATTTTAGAACATGTGACTGTAGATGATCTGCTCGTGTTGTCTTTTACTTATGAT
GGCGAAAGATTATTCGATCTTGAGAGCGTTAGGAGAATTATTTCTGGATTTATGGAGAAA
GAGAAGACTGTGGCGGTTTTTAATGGTGGTGATTTGGGACAACAAGTTTGTTCCACGGCG
ATGCAGAGAGTTGCAAAGACTGTAGATGCGTATCTTGGTGAAATAGCCACTTTTGGGGAC
CTCACTATAGCCAAATTCAATGGAATTGCCATTTTGGTTCCTAAGGGAGCTAGGAAGGTT
GATGATGATCTTTACAGAGCCGTCGATATCTACTTAAAGGCACATCCAAATTTGGATGAA
ATTGAAAGAGAGAAAGTTTGCAGCGTGATGGATACACTGAAACTTTCGTATGAAGCCAGA
GTTCATGCTTCACAGAACAAACGTTTGCCAGTGCAAATAGTCCTTCATGCTCTCTACTTC
GATCAACTGAAGATAAGGAGTGGCGGAGATGATACTAGCAATTTACCCGATGCCATGGCA
ACAAGGAATCAATTACAAGCCGATGTTTCGCTTGTCAAAGAAAACGAAGCTCTAAGAACT
GAACTGTTGAAGATGAAAATGTACATATCCGATATACAGAAAACAAGTCAAGGGACTACT
TCAGCTAAACCCAGTCTTAGCAGGAAGCCAACCTTCTTTTCTTCTGTCTCCAAAAAATTG
GGGAAATTGAATCCCTTTAAGCATGGATCAAAGGACACTTCTATGATTGATGATGCCACT
GTAGATATTACTAAGCCTAGGAGGAGAAGATTTTCCATTTCCTAA

Peptide Sequence

PEP ID

XP_016478257.1
PEP Infomation

PREDICTED: root phototropism protein 2-like [Nicotiana tabacum]
Sequence

MAVPIKNTNRLSLAMERTGQWVFSQEIPTDVVVEVGEANFNLHKFMLVAKSNYIRKLILE
SKETEVTRINLSEIPGGPEMFEKAAKFCYGVNFEITVHNVAALRCAADYLQMTDKYCDNN
LASRTEDFLAQVALTSLSGALVVLKSCENLLPLAEELNIVQRCVEIASAKACVEANFPSR
SPPNWWTEELTILDIAFFERIIISMKTRGAKALTAASAIITYTERSLRDLVRDHSGNGTR
LVEPEDSDIRMHQRQLLESIVKLLPADKAAFPINFLCCLLRTAIFLRAANSCKNELEKRI
SAILEHVTVDDLLVLSFTYDGERLFDLESVRRIISGFMEKEKTVAVFNGGDLGQQVCSTA
MQRVAKTVDAYLGEIATFGDLTIAKFNGIAILVPKGARKVDDDLYRAVDIYLKAHPNLDE
IEREKVCSVMDTLKLSYEARVHASQNKRLPVQIVLHALYFDQLKIRSGGDDTSNLPDAMA
TRNQLQADVSLVKENEALRTELLKMKMYISDIQKTSQGTTSAKPSLSRKPTFFSSVSKKL
GKLNPFKHGSKDTSMIDDATVDITKPRRRRFSIS

Transcript Sequence

Gene sequence data has not been registered.